HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC4AG068720
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: ADP binding
Maps and Mapping Data
Chromosome Start End Strand ID
4A 712785868 712788927 + gene:TRIDC4AG068720
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.22 59,365.75 Da 38.81 86.19 -0.36
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14798 RX-CC_like 291 398 9.94421E-15 IPR038005
Pfam PF00931 NB-ARC domain 446 515 1.2E-10 IPR002182
Pfam PF18052 Rx N-terminal domain 288 367 9.9E-18 IPR041118
Pfam PF00069 Protein kinase domain 4 116 7.3E-14 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 2 123 3.27E-20 IPR011009
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 429 534 9.1E-19 IPR027417
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1 138 3.7E-23 -
Gene3D G3DSA:1.20.5.4130 - 286 390 4.0E-21 -
Gene3D G3DSA:3.40.50.300 - 424 535 1.4E-18 IPR027417
ProSiteProfiles PS50011 Protein kinase domain profile. 1 121 14.987 IPR000719
MobiDBLite mobidb-lite consensus disorder prediction 157 189 - -
MobiDBLite mobidb-lite consensus disorder prediction 158 175 - -
Coils Coil Coil 304 331 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding) GO:0043531 (ADP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G61390.2 S-locus lectin protein kinase family protein. 0
RefSeq XP_037425006.1 disease resistance protein RGA5-like [Triticum dicoccoides] 0
Swiss-Prot Q2R8L1 Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=2 SV=1 0
TrEMBL A0A3B6I338 Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC4AG068720.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.