Basic Information
Locus ID:
gene:TRIDC4AG067560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 706030494 | 706033576 | - | gene:TRIDC4AG067560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 73,004.90 Da | 39.84 | 89.85 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 357 | 623 | 1.59428E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 352 | 552 | 1.4E-45 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 167 | 243 | 4.8E-9 | IPR002902 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 628 | 668 | 3.3E-8 | IPR021820 |
| Pfam | PF01657 | Salt stress response/antifungal | 23 | 127 | 2.7E-17 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 623 | 3.37E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 15 | 128 | 4.8E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 634 | 4.0E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 142 | 247 | 9.6E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 321 | 426 | 7.9E-37 | - |
| SMART | SM00220 | serkin_6 | 351 | 623 | 7.7E-32 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 17 | 124 | 15.637953 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 247 | 16.461695 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 351 | 629 | 37.092575 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 472 | 484 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 20. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_037424979.1 | putative receptor-like protein kinase At4g00960 [Triticum dicoccoides] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6I6L1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG067560.