Basic Information
Locus ID:
gene:TRIDC4AG064410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 690145436 | 690148683 | - | gene:TRIDC4AG064410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.21 | 27,611.40 Da | 49.76 | 56.16 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 201 | 243 | 2.66862E-17 | - |
| Pfam | PF13639 | Ring finger domain | 200 | 243 | 6.2E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 195 | 247 | 9.09E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 188 | 249 | 3.5E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 202 | 242 | 8.2E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 202 | 243 | 12.769585 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 147 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19910.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037423570.1 | E3 ubiquitin-protein ligase BIG BROTHER-like [Triticum dicoccoides] | 0 |
| Q9LT17 | E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I597 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG064410.