Basic Information
Locus ID:
gene:TRIDC4AG059380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 655996463 | 656006094 | + | gene:TRIDC4AG059380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.44 | 90,388.22 Da | 52.55 | 82.89 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 24 | 178 | 2.92631E-53 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 758 | 798 | 4.13817E-22 | - |
| Pfam | PF00069 | Protein kinase domain | 457 | 721 | 6.9E-37 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 24 | 158 | 7.5E-8 | IPR006016 |
| Pfam | PF04564 | U-box domain | 755 | 822 | 2.3E-18 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 433 | 721 | 2.93E-60 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 753 | 823 | 7.24E-23 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 24 | 158 | 2.01E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 524 | 2.5E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 525 | 736 | 3.7E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 22 | 167 | 1.3E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 753 | 823 | 4.2E-28 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 757 | 819 | 1.2E-26 | IPR003613 |
| SMART | SM00220 | serkin_6 | 452 | 727 | 6.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 452 | 727 | 34.930073 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 753 | 823 | 31.75783 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 458 | 479 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 571 | 583 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 413 | - | - |
| Coils | Coil | Coil | 320 | 340 | - | - |
| Coils | Coil | Coil | 373 | 400 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61550.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037423371.1 | U-box domain-containing protein 35-like isoform X2 [Triticum dicoccoides] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I0H7 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG059380.