Basic Information
Locus ID:
gene:TRIDC4AG059360
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 655927602 | 655933094 | - | gene:TRIDC4AG059360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 86,266.21 Da | 54.49 | 83.26 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 22 | 176 | 1.61705E-52 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 723 | 763 | 3.96898E-22 | - |
| Pfam | PF04564 | U-box domain | 720 | 789 | 2.0E-18 | IPR003613 |
| Pfam | PF00582 | Universal stress protein family | 22 | 156 | 1.3E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 422 | 686 | 7.1E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 686 | 1.23E-60 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 718 | 788 | 9.71E-23 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 22 | 156 | 1.84E-14 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 20 | 164 | 1.3E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 398 | 489 | 3.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 701 | 4.6E-48 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 718 | 789 | 7.9E-28 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 722 | 784 | 2.7E-26 | IPR003613 |
| SMART | SM00220 | serkin_6 | 417 | 692 | 1.7E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 692 | 34.901806 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 718 | 789 | 29.687935 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 536 | 548 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 423 | 444 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 381 | - | - |
| Coils | Coil | Coil | 338 | 365 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61550.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037423367.1 | U-box domain-containing protein 35-like [Triticum dicoccoides] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I0I0 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG059360.