Basic Information
Locus ID:
gene:TRIDC4AG059100
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 654697098 | 654699568 | + | gene:TRIDC4AG059100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 75,153.87 Da | 39.39 | 94.80 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 363 | 629 | 2.68009E-91 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 35 | 275 | 4.435E-95 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 35 | 285 | 1.5E-74 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 358 | 625 | 2.0E-46 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 294 | 2.8E-72 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 647 | 3.28E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 643 | 7.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 433 | 3.8E-32 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 32 | 277 | 1.3E-63 | - |
| SMART | SM00220 | serkin_6 | 357 | 627 | 1.0E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 627 | 37.474194 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 148 | 154 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 363 | 386 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037423363.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6I031 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG059100.