HalophFGD

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Basic Information
Locus ID: gene:TRIDC4AG055510
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
Chromosome Start End Strand ID
4A 634405284 634405898 - gene:TRIDC4AG055510
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.44 22,209.54 Da 31.43 93.78 0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18280 BTB_POZ_BPM_plant 26 137 5.01471E-52 -
Pfam PF00651 BTB/POZ domain 29 139 1.4E-24 IPR000210
SUPERFAMILY SSF54695 POZ domain 16 139 3.3E-34 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 13 135 2.0E-39 IPR011333
Gene3D G3DSA:1.25.40.420 - 139 204 6.9E-17 -
SMART SM00225 BTB_4 37 140 2.3E-24 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 37 104 17.272514 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06190.1 BTB-POZ and MATH domain 2. 0
RefSeq XP_044361189.1 BTB/POZ and MATH domain-containing protein 2-like [Triticum aestivum] 0
Swiss-Prot Q9M8J9 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 0
TrEMBL A0A453J0Q1 BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC4AG055510.

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