Basic Information
Locus ID:
gene:TRIDC4AG055310
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin-conjugating enzyme
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 633767335 | 633770497 | + | gene:TRIDC4AG055310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 28,456.63 Da | 65.64 | 70.08 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 78 | 214 | 3.86182E-48 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 81 | 213 | 1.2E-37 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 76 | 219 | 3.17E-44 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 66 | 228 | 3.9E-48 | IPR016135 |
| SMART | SM00212 | ubc_7 | 75 | 219 | 1.4E-49 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 71 | 219 | 42.65099 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 144 | 160 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 248 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_037423116.1 | ubiquitin-conjugating enzyme E2 4-like [Triticum dicoccoides] | 0 |
| P42748 | Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6I5F3 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG055310.