Basic Information
Locus ID:
gene:TRIDC4AG054690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Tetratricopeptide repeat (TPR)-like superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 630355795 | 630359900 | + | gene:TRIDC4AG054690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 82,272.51 Da | 50.55 | 83.26 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 60 | 1.5E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 78 | 9.32E-16 | IPR036047 |
| SUPERFAMILY | SSF48452 | TPR-like | 400 | 589 | 9.32E-9 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 398 | 701 | 1.3E-11 | IPR011990 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 55 | 1.5E-7 | - |
| SMART | SM00028 | tpr_5 | 557 | 590 | 390.0 | IPR019734 |
| SMART | SM00256 | fbox_2 | 16 | 59 | 3.5E-7 | IPR001810 |
| SMART | SM00028 | tpr_5 | 515 | 548 | 33.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 404 | 437 | 11.0 | IPR019734 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 715 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 748 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 712 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37210.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_037423078.1 | uncharacterized protein LOC119287605 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6I353 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG054690.