Basic Information
Locus ID:
gene:TRIDC4AG051260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Castor and Pollux, part of voltage-gated ion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 612991570 | 613013284 | - | gene:TRIDC4AG051260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 106,147.38 Da | 51.52 | 99.14 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06241 | Castor and Pollux, part of voltage-gated ion channel | 553 | 650 | 1.5E-40 | IPR010420 |
| Pfam | PF00069 | Protein kinase domain | 31 | 302 | 1.3E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 305 | 6.74E-68 | IPR011009 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 411 | 561 | 2.56E-5 | IPR036291 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 326 | 2.4E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 99 | 1.1E-20 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 402 | 547 | 5.1E-16 | - |
| SMART | SM00220 | serkin_6 | 29 | 308 | 8.0E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 29 | 308 | 34.95834 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 35 | 57 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 160 | 172 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 391 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49960.1 | 0 | |
| RefSeq | XP_037422870.1 | probable ion channel POLLUX isoform X1 [Triticum dicoccoides] | 0 |
| Q5N941 | Probable ion channel POLLUX OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0870100 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453G0W0 | Castor_Poll_mid domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG051260.