Basic Information
Locus ID:
gene:TRIDC4AG049810
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U11 U12 small nuclear ribonucleoprotein 31 kDa
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 606784423 | 606785964 | + | gene:TRIDC4AG049810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 32,337.12 Da | 49.72 | 110.62 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 59 | 1.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 85 | 1.05E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 119 | 226 | 1.26E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 67 | 1.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 99 | 264 | 8.7E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 27 | 68 | 7.4E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 21 | 66 | 9.576953 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02910.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_037424617.1 | F-box/FBD/LRR-repeat protein At5g22700-like [Triticum dicoccoides] | 0 |
| Q9LYZ4 | F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6HYB2 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG049810.