Basic Information
Locus ID:
gene:TRIDC4AG049630
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 605853150 | 605858880 | - | gene:TRIDC4AG049630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.95 | 44,833.40 Da | 65.21 | 72.10 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 78 | 395 | 4.33E-33 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 270 | 396 | 4.1E-11 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 42 | 269 | 3.2E-23 | IPR015943 |
| SMART | SM00320 | WD40_4 | 74 | 112 | 3.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 218 | 258 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 313 | 351 | 20.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 170 | 213 | 2.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 356 | 395 | 3.7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 79 | 121 | 8.971213 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 45 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50970.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037422780.1 | U5 small nuclear ribonucleoprotein 40 kDa protein-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A453MJF0 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG049630.