Basic Information
Locus ID:
gene:TRIDC4AG049440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 605252364 | 605261349 | - | gene:TRIDC4AG049440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 81,417.49 Da | 56.02 | 77.16 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 135 | 174 | 0.0047 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 106 | 252 | 1.87E-27 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 272 | 2.0E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 680 | 720 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 177 | 214 | 0.75 | IPR001680 |
| SMART | SM00320 | WD40_4 | 93 | 131 | 2.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 134 | 174 | 1.8E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 141 | 183 | 11.510997 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 141 | 177 | 8.887423 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 161 | 175 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 352 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04140.1 | Transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037422774.1 | uncharacterized protein LOC119287341 [Triticum dicoccoides] | 0 |
| B0XYC8 | Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus fumigatus (strain CBS 144.89 / FGSC A1163 / CEA10) OX=451804 GN=tif34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8R7Q952 | WD_REPEATS_REGION domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG049440.