Basic Information
Locus ID:
gene:TRIDC4AG047950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 598172645 | 598177906 | - | gene:TRIDC4AG047950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 47,197.34 Da | 29.12 | 93.01 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 89 | 122 | 6.4E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 296 | 331 | 5.0E-9 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 88 | 411 | 8.7E-36 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 65 | 174 | 4.6E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 201 | 419 | 4.7E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 242 | 281 | 7.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 292 | 331 | 1.9E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 203 | 239 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 84 | 123 | 3.9E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 299 | 333 | 17.325764 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 91 | 132 | 10.074014 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 299 | 333 | 14.212849 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 318 | 332 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 85 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00090.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037419088.1 | transducin beta-like protein 2 [Triticum dicoccoides] | 0 |
| Q9Y4P3 | Transducin beta-like protein 2 OS=Homo sapiens OX=9606 GN=TBL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HXV8 | Transducin beta-like protein 2 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG047950.