Basic Information
Locus ID:
gene:TRIDC4AG047400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 595739275 | 595742717 | - | gene:TRIDC4AG047400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 117,924.79 Da | 28.82 | 111.64 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 804 | 1075 | 2.94377E-83 | - |
| Pfam | PF13855 | Leucine rich repeat | 271 | 330 | 7.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 640 | 694 | 4.3E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 563 | 585 | 1.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 1.6E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 799 | 1001 | 3.0E-40 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 356 | 704 | 5.65E-64 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 776 | 1072 | 3.64E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 81 | 427 | 7.77E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 435 | 730 | 5.7E-86 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 874 | 1083 | 7.3E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 197 | 3.0E-46 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 759 | 873 | 4.1E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 434 | 1.8E-61 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 0.064 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 489 | 512 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 365 | 389 | 91.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 681 | 706 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 657 | 680 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 798 | 1076 | 7.8E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 798 | 1048 | 34.534321 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 659 | 681 | 7.303818 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 919 | 931 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 804 | 826 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 588 | 601 | 2.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 657 | 670 | 2.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037422655.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I1C9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG047400.