Basic Information
Locus ID:
gene:TRIDC4AG047370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain-containing protein 33
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 595617649 | 595624252 | - | gene:TRIDC4AG047370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 63,319.43 Da | 37.11 | 75.56 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 491 | 530 | 9.17411E-23 | - |
| Pfam | PF00069 | Protein kinase domain | 212 | 467 | 5.8E-44 | IPR000719 |
| Pfam | PF04564 | U-box domain | 488 | 558 | 8.7E-19 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 190 | 467 | 8.63E-69 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 479 | 557 | 4.86E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 188 | 283 | 2.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 284 | 484 | 3.5E-48 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 486 | 559 | 1.6E-26 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 490 | 553 | 6.3E-25 | IPR003613 |
| SMART | SM00220 | serkin_6 | 211 | 478 | 8.4E-33 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 486 | 559 | 27.564968 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 211 | 478 | 34.336445 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 329 | 341 | - | IPR008271 |
| Coils | Coil | Coil | 148 | 168 | - | - |
| Coils | Coil | Coil | 52 | 79 | - | - |
| Coils | Coil | Coil | 120 | 140 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037419071.1 | U-box domain-containing protein 33-like [Triticum dicoccoides] | 0 |
| Q5WA76 | U-box domain-containing protein 70 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB70 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6MW41 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG047370.