Basic Information
Locus ID:
gene:TRIDC4AG046800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 593052000 | 593055314 | + | gene:TRIDC4AG046800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 115,056.72 Da | 32.23 | 105.70 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 127 | 149 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 31 | 90 | 9.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 151 | 210 | 9.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 587 | 642 | 6.7E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 223 | 245 | 0.3 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 462 | 521 | 2.5E-7 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 271 | 307 | 1.8E-7 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 755 | 1017 | 6.3E-45 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 11 | 387 | 4.87E-79 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 740 | 1019 | 1.48E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 323 | 644 | 4.71E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 392 | 6.0E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 713 | 832 | 6.7E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 241 | 9.2E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 833 | 1036 | 2.1E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 393 | 684 | 2.8E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 140 | 2.6E-48 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 269 | 292 | 0.95 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 53 | 76 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 340 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 605 | 628 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 363 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 315 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 220 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 196 | 0.95 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 629 | 654 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 125 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 532 | 555 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 77 | 100 | 2.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 244 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 172 | 260.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 125 | 144 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 149 | 164 | 680.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 484 | 510 | 110.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 173 | 195 | 300.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 197 | 220 | 210.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 532 | 555 | 260.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 77 | 109 | 93.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 269 | 291 | 300.0 | - |
| SMART | SM00369 | LRR_typ_2 | 29 | 52 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 245 | 268 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 365 | 389 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 484 | 508 | 17.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 221 | 247 | 150.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 29 | 58 | 470.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 293 | 322 | 300.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 175 | 197 | 7.365424 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 271 | 293 | 7.365424 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 754 | 1024 | 36.668556 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 878 | 890 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 760 | 783 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 176 | 189 | 2.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 484 | 497 | 2.2E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037422612.1 | MDIS1-interacting receptor like kinase 2-like [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A1W5MKD2 | Putative LRR receptor-like protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG046800.