Basic Information
Locus ID:
gene:TRIDC4AG045270
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NPR1/NIM1 like defence protein C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 588642140 | 588646584 | + | gene:TRIDC4AG045270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 66,606.09 Da | 43.78 | 92.40 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 35 | 193 | 1.42656E-55 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 277 | 364 | 7.1E-7 | IPR020683 |
| Pfam | PF12313 | NPR1/NIM1 like defence protein C terminal | 378 | 582 | 6.8E-79 | IPR021094 |
| Pfam | PF00651 | BTB/POZ domain | 57 | 142 | 4.1E-6 | IPR000210 |
| Pfam | PF11900 | Domain of unknown function (DUF3420) | 230 | 275 | 2.0E-8 | IPR024228 |
| SUPERFAMILY | SSF54695 | POZ domain | 37 | 191 | 2.04E-9 | IPR011333 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 273 | 380 | 3.58E-15 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 257 | 414 | 1.3E-16 | IPR036770 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 22 | 225 | 2.1E-16 | IPR011333 |
| SMART | SM00248 | ANK_2a | 298 | 332 | 370.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 336 | 365 | 0.018 | IPR002110 |
| SMART | SM00225 | BTB_4 | 55 | 193 | 6.1E-6 | IPR000210 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 336 | 368 | 11.3005 | IPR002110 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 55 | 143 | 13.922031 | IPR000210 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 336 | 363 | 10.630358 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 572 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 572 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45110.1 | NPR1-like protein 3. Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. | 0 |
| RefSeq | XP_037422521.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR3-like [Triticum dicoccoides] | 0 |
| Q75HA6 | BTB/POZ domain and ankyrin repeat-containing protein NPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6I0R0 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG045270.