Basic Information
Locus ID:
gene:TRIDC4AG043860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 583156930 | 583160411 | - | gene:TRIDC4AG043860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 63,831.03 Da | 39.18 | 80.64 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 100 | 359 | 2.18277E-121 | - |
| CDD | cd00051 | EFh | 479 | 541 | 5.6417E-16 | IPR002048 |
| CDD | cd00051 | EFh | 408 | 467 | 5.59093E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 406 | 468 | 6.8E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 478 | 541 | 2.1E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 101 | 360 | 4.9E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 384 | 553 | 8.55E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 97 | 368 | 4.05E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 188 | 368 | 1.5E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 369 | 543 | 1.7E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 103 | 187 | 2.5E-22 | - |
| SMART | SM00054 | efh_1 | 515 | 543 | 5.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 479 | 507 | 0.008 | IPR002048 |
| SMART | SM00054 | efh_1 | 407 | 435 | 2.1E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 101 | 360 | 3.0E-92 | IPR000719 |
| SMART | SM00054 | efh_1 | 443 | 471 | 0.013 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 439 | 474 | 10.887003 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 403 | 438 | 15.433954 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 101 | 360 | 47.382126 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 511 | 546 | 12.78389 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 475 | 510 | 12.449146 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 488 | 500 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 222 | 234 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 107 | 131 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 452 | 464 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 416 | 428 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 524 | 536 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 85 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_037422422.1 | calcium-dependent protein kinase 9-like [Triticum dicoccoides] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I184 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG043860.