Basic Information
Locus ID:
gene:TRIDC4AG041390
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 570494819 | 570498699 | - | gene:TRIDC4AG041390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 96,026.83 Da | 35.28 | 85.25 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 542 | 814 | 5.7757E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2 | 12 | 0.024 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 341 | 377 | 2.3E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 279 | 314 | 18.0 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 538 | 812 | 5.7E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 384 | 4.42E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 516 | 823 | 1.69E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 498 | 613 | 1.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 402 | 1.2E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 614 | 832 | 7.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 273 | 2.8E-77 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 364 | 386 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 85 | 109 | 190.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 536 | 822 | 1.3E-46 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 186 | 208 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 233 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 61 | 84 | 0.31 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 536 | 817 | 40.4282 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 661 | 673 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 542 | 564 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 891 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 428 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_037422241.1 | receptor protein kinase TMK1-like [Triticum dicoccoides] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7U4J6 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG041390.