Basic Information
Locus ID:
gene:TRIDC4AG040180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
FANCL C-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 563109506 | 563112819 | + | gene:TRIDC4AG040180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 25,236.48 Da | 56.40 | 85.09 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16490 | RING-CH-C4HC3_FANCL | 152 | 218 | 6.029E-23 | - |
| Pfam | PF18890 | FANCL UBC-like domain 2 | 8 | 94 | 5.5E-13 | IPR043898 |
| Pfam | PF11793 | FANCL C-terminal domain | 149 | 225 | 2.0E-28 | IPR026850 |
| SUPERFAMILY | SSF57850 | RING/U-box | 146 | 224 | 4.49E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 227 | 6.3E-27 | IPR013083 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 8 | 96 | 2.6E-26 | IPR016135 |
| SMART | SM01197 | FANCL_C_2 | 149 | 226 | 1.5E-44 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65740.2 | zinc ion binding. | 0 |
| RefSeq | XP_037422168.1 | E3 ubiquitin-protein ligase FANCL-like isoform X3 [Triticum dicoccoides] | 0 |
| Q9CR14 | E3 ubiquitin-protein ligase FANCL OS=Mus musculus OX=10090 GN=Fancl PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HWB1 | E3 ubiquitin-protein ligase FANCL OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG040180.