Basic Information
Locus ID:
gene:TRIDC4AG039380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 555709520 | 555711667 | - | gene:TRIDC4AG039380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 56,825.20 Da | 44.64 | 82.05 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 29 | 265 | 8.84123E-69 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 28 | 267 | 7.2E-59 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 360 | 443 | 7.7E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 453 | 3.05E-24 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 27 | 268 | 2.11E-56 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 26 | 282 | 1.5E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 432 | 8.5E-27 | - |
| SMART | SM00219 | tyrkin_6 | 357 | 478 | 0.0018 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 518 | 11.538304 | IPR000719 |
| ProSitePatterns | PS00308 | Legume lectins alpha-chain signature. | 234 | 243 | - | IPR000985 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 151 | 157 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 363 | 384 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65600.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_044360604.1 | L-type lectin-domain containing receptor kinase IX.1-like [Triticum aestivum] | 0 |
| Q9LSL5 | L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HZ65 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG039380.