Basic Information
Locus ID:
gene:TRIDC4AG038050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
UBX domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 543450723 | 543459050 | + | gene:TRIDC4AG038050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 63,257.43 Da | 62.25 | 70.75 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01767 | UBX | 378 | 450 | 4.86476E-14 | - |
| Pfam | PF00789 | UBX domain | 372 | 450 | 7.3E-15 | IPR001012 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 369 | 451 | 3.1E-15 | IPR029071 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 70 | 191 | 8.44E-16 | IPR036249 |
| Gene3D | G3DSA:3.10.20.90 | - | 366 | 452 | 1.1E-18 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 83 | 191 | 2.4E-9 | - |
| SMART | SM00166 | ubx_3 | 368 | 451 | 2.7E-4 | IPR001012 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 371 | 449 | 16.787619 | IPR001012 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 376 | 450 | 8.872685 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 577 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43210.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_044364641.1 | plant UBX domain-containing protein 11-like isoform X1 [Triticum aestivum] | 0 |
| Q9ZW74 | Plant UBX domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUX11 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7U538 | UBX domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG038050.