Basic Information
Locus ID:
gene:TRIDC4AG037530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 539151070 | 539153423 | - | gene:TRIDC4AG037530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 28,744.83 Da | 67.82 | 70.23 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 206 | 249 | 4.6E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 197 | 255 | 1.34E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 186 | 254 | 1.0E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 207 | 248 | 9.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 207 | 249 | 11.972923 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 39 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037421965.1 | probable E3 ubiquitin-protein ligase RHY1A [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6HZN4 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG037530.