Basic Information
Locus ID:
gene:TRIDC4AG037230
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 537183678 | 537190270 | + | gene:TRIDC4AG037230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 69,931.64 Da | 44.04 | 86.58 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 21 | 124 | 7.29691E-45 | - |
| Pfam | PF00651 | BTB/POZ domain | 28 | 116 | 2.2E-5 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 211 | 466 | 7.3E-87 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 117 | 4.0E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 17 | 119 | 2.4E-11 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 10.902459 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 490 | 87.954361 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 634 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 634 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_037421951.1 | BTB/POZ domain-containing protein NPY4-like [Triticum dicoccoides] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7Q1L7 | BTB/POZ domain-containing protein NPY2 OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG037230.