Basic Information
Locus ID:
gene:TRIDC4AG035350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 520388231 | 520397827 | - | gene:TRIDC4AG035350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 60,798.08 Da | 47.99 | 64.11 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 351 | 376 | 0.0044 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 305 | 334 | 3.6E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 173 | 518 | 1.18E-36 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 20 | 528 | 2.0E-96 | IPR015943 |
| SMART | SM00320 | WD40_4 | 224 | 266 | 1.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 379 | 431 | 0.42 | IPR001680 |
| SMART | SM00320 | WD40_4 | 295 | 334 | 2.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 482 | 519 | 40.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 337 | 376 | 0.0071 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 344 | 385 | 10.241105 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 309 | 343 | 9.004632 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 569 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37160.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037421807.1 | WD repeat-containing protein 20-like [Triticum dicoccoides] | 0 |
| A1DMI8 | Probable catabolite repression protein creC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=creC PE=3 SV=1 | 0 | |
| TrEMBL | A0A453HHY6 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG035350.