Basic Information
Locus ID:
gene:TRIDC4AG034740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 513898156 | 513907384 | + | gene:TRIDC4AG034740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 46,054.01 Da | 47.43 | 78.65 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 3 | 40 | 1.1E-6 | IPR001810 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 97 | 413 | 9.42E-34 | IPR011047 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 54 | 2.49E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 35 | 7.4E-6 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 68 | 171 | 1.5E-5 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 172 | 414 | 2.4E-22 | IPR015943 |
| SMART | SM00320 | WD40_4 | 146 | 193 | 320.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 237 | 278 | 0.39 | IPR001680 |
| SMART | SM00320 | WD40_4 | 373 | 411 | 380.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 196 | 234 | 3.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 75 | 112 | 170.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 281 | 321 | 220.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 365 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52030.2 | F-box family protein with WD40/YVTN repeat doamin. | 0 |
| RefSeq | XP_037421778.1 | F-box/WD-40 repeat-containing protein At3g52030-like [Triticum dicoccoides] | 0 |
| Q9SV01 | F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana OX=3702 GN=At3g52030 PE=4 SV=2 | 0 | |
| TrEMBL | A0A8R7Q2Q9 | F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG034740.