Basic Information
Locus ID:
gene:TRIDC4AG034540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ICP0-binding domain of Ubiquitin-specific protease 7
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 511598077 | 511605745 | + | gene:TRIDC4AG034540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 91,724.25 Da | 52.03 | 90.72 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 726 | 767 | 1.98662E-22 | - |
| Pfam | PF00069 | Protein kinase domain | 459 | 706 | 1.2E-27 | IPR000719 |
| Pfam | PF04564 | U-box domain | 723 | 791 | 4.2E-16 | IPR003613 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 118 | 280 | 1.5E-39 | IPR024729 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 440 | 720 | 3.83E-50 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 721 | 791 | 2.12E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 437 | 526 | 2.2E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 722 | 796 | 2.4E-25 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 527 | 721 | 5.0E-34 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 169 | 281 | 9.7E-37 | - |
| SMART | SM00504 | Ubox_2 | 725 | 788 | 8.1E-24 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 458 | 714 | 25.022139 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 721 | 795 | 34.190395 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 43 | - | - |
| Coils | Coil | Coil | 327 | 403 | - | - |
| Coils | Coil | Coil | 411 | 431 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037421769.1 | U-box domain-containing protein 57-like isoform X1 [Triticum dicoccoides] | 0 |
| Q0DR28 | U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB57 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453HJ48 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG034540.