Basic Information
Locus ID:
gene:TRIDC4AG034370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 508430060 | 508432774 | - | gene:TRIDC4AG034370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 48,071.73 Da | 38.89 | 72.70 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 91 | 128 | 7.0E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 134 | 170 | 5.7E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 283 | 305 | 0.039 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2 | 308 | 9.73E-51 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 319 | 1.6E-54 | IPR015943 |
| SMART | SM00320 | WD40_4 | 89 | 128 | 3.1E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 172 | 211 | 7.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 224 | 264 | 4.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 131 | 170 | 9.0E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 265 | 306 | 0.0097 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1 | 28 | 9.305395 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 96 | 137 | 16.623981 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 96 | 131 | 13.052855 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 137 | 171 | 11.778342 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 137 | 171 | 9.836508 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 115 | 129 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 6 | 20 | 1.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 157 | 171 | 1.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 115 | 129 | 1.2E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 376 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37670.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_044360521.1 | WD repeat-containing protein 44-like [Triticum aestivum] | 0 |
| Q9XSC3 | WD repeat-containing protein 44 OS=Bos taurus OX=9913 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HWR1 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG034370.