Basic Information
Locus ID:
gene:TRIDC4AG033190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 496023892 | 496028627 | - | gene:TRIDC4AG033190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 48,821.57 Da | 49.46 | 72.70 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01167 | Tub family | 116 | 435 | 9.4E-112 | IPR000007 |
| Pfam | PF00646 | F-box domain | 52 | 105 | 5.0E-12 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 46 | 97 | 2.35E-6 | IPR036047 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 102 | 440 | 2.62E-97 | IPR025659 |
| Gene3D | G3DSA:1.20.1280.50 | - | 48 | 101 | 3.1E-5 | - |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 112 | 434 | 3.7E-93 | IPR025659 |
| ProSitePatterns | PS01200 | Tub family signature 1. | 359 | 372 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 397 | 416 | 5.3E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 359 | 375 | 5.3E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 418 | 440 | 5.3E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 235 | 262 | 5.3E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 185 | 209 | 5.3E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 341 | 358 | 5.3E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 169 | 185 | 5.3E-75 | IPR000007 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76900.1 | tubby like protein 1. Member of TLP family | 0 |
| RefSeq | XP_037421684.1 | tubby-like F-box protein 13 [Triticum dicoccoides] | 0 |
| Q53PP5 | Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6HUS0 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG033190.