Basic Information
Locus ID:
gene:TRIDC4AG032780
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CDPK9
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 493259026 | 493263472 | + | gene:TRIDC4AG032780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 56,701.89 Da | 38.24 | 84.27 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 353 | 412 | 1.41475E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 46 | 304 | 2.7801E-144 | - |
| CDD | cd00051 | EFh | 425 | 484 | 4.48155E-18 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 47 | 305 | 2.1E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 353 | 413 | 5.0E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 423 | 484 | 1.3E-12 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 345 | 485 | 3.75E-47 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 315 | 9.58E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 345 | 2.1E-62 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 346 | 417 | 3.6E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 418 | 508 | 8.4E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 49 | 133 | 3.5E-27 | - |
| SMART | SM00054 | efh_1 | 388 | 416 | 0.0067 | IPR002048 |
| SMART | SM00054 | efh_1 | 424 | 452 | 0.0022 | IPR002048 |
| SMART | SM00054 | efh_1 | 352 | 380 | 6.6E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 458 | 486 | 7.2E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 47 | 305 | 2.0E-98 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 384 | 419 | 11.082272 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 305 | 47.382126 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 458 | 489 | 11.779655 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 420 | 455 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 348 | 383 | 15.573431 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 361 | 373 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 433 | 445 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 397 | 409 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 76 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 467 | 479 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23580.1 | calmodulin-like domain protein kinase 9. unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus; recombinant protein is fully active and induced by Ca2+ | 0 |
| RefSeq | XP_037421652.1 | calcium-dependent protein kinase 24-like [Triticum dicoccoides] | 0 |
| Q2QX45 | Calcium-dependent protein kinase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK28 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8R7U5X8 | Calcium-dependent protein kinase 11 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG032780.