HalophFGD

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Basic Information
Locus ID: gene:TRIDC4AG031370
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
4A 473537641 473538712 - gene:TRIDC4AG031370
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.70 19,435.73 Da 31.00 57.60 -0.62
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 136 170 1.6755E-8 -
Pfam PF00651 BTB/POZ domain 134 172 4.7E-7 IPR000210
SUPERFAMILY SSF54695 POZ domain 121 170 1.1E-7 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 108 175 1.6E-10 IPR011333
ProSiteProfiles PS50097 BTB domain profile. 137 175 10.240635 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G56230.1 BTB/POZ domain-containing protein. 0
RefSeq XP_037421578.1 BTB/POZ domain-containing protein At3g56230-like [Triticum dicoccoides] 0
Swiss-Prot Q9LYL9 BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana OX=3702 GN=At3g56230 PE=2 SV=1 0
TrEMBL A0A3B6HUC3 BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC4AG031370.

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