Basic Information
Locus ID:
gene:TRIDC4AG030020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK17
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 461537391 | 461540806 | + | gene:TRIDC4AG030020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 58,331.98 Da | 42.18 | 82.98 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 479 | 522 | 4.2449E-11 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 98 | 355 | 2.88703E-127 | - |
| CDD | cd00051 | EFh | 404 | 463 | 1.39092E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 404 | 464 | 1.5E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 473 | 522 | 1.7E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 98 | 356 | 8.3E-72 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 364 | 4.86E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 396 | 522 | 8.2E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 364 | 9.1E-55 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 374 | 522 | 1.8E-50 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 397 | 465 | 1.8E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 100 | 183 | 7.0E-30 | - |
| SMART | SM00054 | efh_1 | 403 | 431 | 3.1E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 475 | 503 | 0.001 | IPR002048 |
| SMART | SM00054 | efh_1 | 439 | 467 | 2.6E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 98 | 356 | 5.5E-93 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 98 | 356 | 46.590622 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 471 | 506 | 14.959732 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 399 | 434 | 15.127104 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 435 | 470 | 12.225983 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 412 | 424 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 484 | 496 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 218 | 230 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 448 | 460 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 104 | 131 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 80 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12180.1 | calcium-dependent protein kinase 17. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037421476.1 | calcium-dependent protein kinase 25-like [Triticum dicoccoides] | 0 |
| Q9FMP5 | Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6HY01 | Calcium-dependent protein kinase 34 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG030020.