Basic Information
Locus ID:
gene:TRIDC4AG029840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 460149323 | 460159375 | + | gene:TRIDC4AG029840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 81,359.33 Da | 40.55 | 84.30 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00053 | EGF | 187 | 214 | 2.28391E-4 | - |
| CDD | cd01098 | PAN_AP_plant | 232 | 315 | 1.03962E-18 | - |
| Pfam | PF01453 | D-mannose binding lectin | 1 | 64 | 2.1E-14 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 152 | 216 | 6.5E-10 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 430 | 702 | 3.7E-53 | IPR000719 |
| Pfam | PF00024 | PAN domain | 244 | 293 | 5.1E-6 | IPR003609 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 243 | 292 | 4.71E-6 | - |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 1 | 106 | 1.57E-16 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 409 | 704 | 8.5E-72 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 1 | 48 | 5.7E-8 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 393 | 501 | 2.9E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 502 | 711 | 1.8E-56 | - |
| Gene3D | G3DSA:3.50.4.10 | Hepatocyte Growth Factor | 239 | 315 | 3.4E-5 | - |
| SMART | SM00473 | ntp_6 | 239 | 313 | 1.5E-5 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 1 | 712 | 2.4E-192 | IPR024171 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 184 | 220 | 9.503986 | IPR000742 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 47 | 9.627422 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 705 | 36.612019 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 235 | 316 | 8.943619 | IPR003609 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 433 | 455 | - | IPR017441 |
| Coils | Coil | Coil | 450 | 470 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_048570128.1 | putative receptor protein kinase ZmPK1 [Triticum urartu] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6HTC9 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG029840.