Basic Information
Locus ID:
gene:TRIDC4AG029660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 459298593 | 459300835 | - | gene:TRIDC4AG029660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 14,602.48 Da | 55.18 | 76.36 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01791 | Ubl_UBL5 | 57 | 127 | 6.16843E-54 | - |
| Pfam | PF00240 | Ubiquitin family | 67 | 126 | 3.2E-6 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 52 | 129 | 6.31E-25 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 42 | 129 | 3.2E-31 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 58 | 129 | 10.309861 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 36 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42300.1 | ubiquitin-like protein 5. | 0 |
| RefSeq | XP_037421446.1 | ubiquitin-like protein 5 [Triticum dicoccoides] | 0 |
| Q9FGZ9 | Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1 | 0 | |
| TrEMBL | A0A453HRM5 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG029660.