Basic Information
Locus ID:
gene:TRIDC4AG027880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 435644764 | 435660295 | + | gene:TRIDC4AG027880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 51,561.09 Da | 37.75 | 98.10 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 161 | 421 | 4.05325E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 157 | 421 | 9.1E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 11 | 54 | 6.6E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 133 | 420 | 1.75E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 79 | 1.36E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 99 | 1.2E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 231 | 441 | 1.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 128 | 230 | 9.7E-32 | - |
| SMART | SM00220 | serkin_6 | 155 | 427 | 7.9E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 155 | 427 | 35.438896 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 273 | 285 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 161 | 183 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 20 | 33 | 6.5E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 41 | 54 | 6.5E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 468 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19190.1 | FLG22-induced receptor-like kinase 1. Receptor-like protein kinase. Involved in early defense signaling. | 0 |
| RefSeq | XP_048570651.1 | probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Triticum urartu] | 0 |
| O64483 | Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana OX=3702 GN=SIRK PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HTH0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG027880.