Basic Information
Locus ID:
gene:TRIDC4AG025750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 371858792 | 371862802 | - | gene:TRIDC4AG025750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 38,283.06 Da | 54.35 | 85.31 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 179 | 201 | 0.021 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 123 | 360 | 2.93E-23 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 30 | 360 | 3.8E-50 | IPR015943 |
| SMART | SM00320 | WD40_4 | 286 | 325 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 164 | 202 | 0.74 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 72 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01470.1 | SEC12P-like 2 protein. Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. | 0 |
| RefSeq | XP_037421180.1 | SEC12-like protein 2 isoform X2 [Triticum dicoccoides] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A3B6HUM6 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG025750.