Basic Information
Locus ID:
gene:TRIDC4AG022150
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RWD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 264630390 | 264667658 | + | gene:TRIDC4AG022150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 41,517.15 Da | 56.76 | 71.78 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05773 | RWD domain | 7 | 112 | 5.8E-9 | IPR006575 |
| SUPERFAMILY | SSF54495 | UBC-like | 4 | 114 | 1.21E-19 | IPR016135 |
| SUPERFAMILY | SSF57850 | RING/U-box | 123 | 163 | 3.65E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 120 | 231 | 1.3E-16 | IPR013083 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 2 | 119 | 4.1E-20 | IPR016135 |
| SMART | SM00184 | ring_2 | 124 | 212 | 1.5E-5 | IPR001841 |
| SMART | SM00591 | RWD2001b | 11 | 117 | 3.3E-11 | IPR006575 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 124 | 213 | 9.037076 | IPR001841 |
| ProSiteProfiles | PS50908 | RWD domain profile. | 11 | 117 | 15.737711 | IPR006575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 323 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60300.1 | RWD domain-containing protein. | 0 |
| RefSeq | XP_037420988.1 | E3 ubiquitin-protein ligase RNF25-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6HU11 | E3 ubiquitin-protein ligase RNF25 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG022150.