Basic Information
Locus ID:
gene:TRIDC4AG018990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 189657631 | 189662933 | - | gene:TRIDC4AG018990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.98 | 69,383.07 Da | 43.20 | 97.96 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 346 | 613 | 8.46401E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 84 | 133 | 4.4E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 343 | 608 | 5.5E-38 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 4.0E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 610 | 2.05E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 229 | 1.47E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 232 | 3.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 143 | 4.6E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 306 | 415 | 5.4E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 417 | 632 | 4.9E-49 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 340 | 617 | 31.764057 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 346 | 377 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 145 | 158 | 6.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 188 | 201 | 6.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 637 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58300.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037420850.1 | probable inactive receptor kinase At5g58300 [Triticum dicoccoides] | 0 |
| Q9LVM0 | Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana OX=3702 GN=At5g58300 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HUX6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG018990.