Basic Information
Locus ID:
gene:TRIDC4AG018690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 184191688 | 184194871 | - | gene:TRIDC4AG018690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 94,569.10 Da | 41.41 | 103.94 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 612 | 878 | 1.36566E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 186 | 242 | 8.9E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 328 | 346 | 1.2 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 608 | 875 | 6.8E-43 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 376 | 433 | 8.8E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 66 | 123 | 2.5E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 136 | 156 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 610 | 875 | 3.99E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 223 | 473 | 7.06E-46 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 6 | 291 | 1.26E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 374 | 492 | 3.4E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 683 | 887 | 1.9E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 596 | 682 | 2.6E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 373 | 1.3E-109 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 349 | 373 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 14 | 37 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 230 | 254 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 396 | 419 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 38 | 62 | 5.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 444 | 468 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 229 | 75.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 606 | 878 | 36.074928 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 612 | 635 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 399 | 412 | 8.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 420 | 433 | 8.7E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56370.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037420828.1 | probable LRR receptor-like serine/threonine-protein kinase IRK [Triticum dicoccoides] | 0 |
| Q9LY03 | Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana OX=3702 GN=IRK PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HTH7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG018690.