Basic Information
Locus ID:
gene:TRIDC4AG017650
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 164275504 | 164280007 | + | gene:TRIDC4AG017650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 112,588.41 Da | 38.41 | 96.83 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 763 | 1034 | 4.98911E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 761 | 960 | 4.3E-25 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 67 | 6.0E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 89 | 130 | 5.5E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 315 | 337 | 0.48 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 291 | 306 | 0.93 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 243 | 562 | 1.49E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 761 | 1036 | 2.81E-41 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 306 | 1.19E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 584 | 2.5E-80 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 745 | 834 | 6.3E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 209 | 6.1E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 836 | 1044 | 1.0E-32 | - |
| SMART | SM00369 | LRR_typ_2 | 165 | 188 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 116 | 7.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 517 | 541 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 140 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 164 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 289 | 19.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 119 | 142 | 7.758159 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 757 | 1040 | 25.5875 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 703 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 668 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27060.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037420740.1 | probable inactive receptor kinase At5g10020 [Triticum dicoccoides] | 0 |
| Q0WR59 | Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana OX=3702 GN=At5g10020 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6HRK2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG017650.