Basic Information
Locus ID:
gene:TRIDC4AG017410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 161832107 | 161837099 | - | gene:TRIDC4AG017410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 28,909.25 Da | 52.52 | 78.94 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 108 | 135 | 7.3E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 13 | 139 | 1.48E-17 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 150 | 1.3E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 52 | 92 | 1.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 95 | 136 | 0.034 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62770.1 | Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence. | 0 |
| RefSeq | XP_037420721.1 | autophagy-related protein 18a-like isoform X1 [Triticum dicoccoides] | 0 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IPQ7 | Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG017410.