Basic Information
Locus ID:
gene:TRIDC4AG016060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Dip2/Utp12 Family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 140357324 | 140362964 | + | gene:TRIDC4AG016060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 67,417.16 Da | 38.43 | 89.86 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 10 | 35 | 0.0033 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 191 | 229 | 0.046 | IPR001680 |
| Pfam | PF04003 | Dip2/Utp12 Family | 486 | 577 | 3.6E-10 | IPR007148 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 14 | 235 | 9.02E-35 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 308 | 4.3E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 4 | 35 | 4.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 189 | 229 | 0.077 | IPR001680 |
| SMART | SM00320 | WD40_4 | 107 | 146 | 0.35 | IPR001680 |
| SMART | SM00320 | WD40_4 | 149 | 186 | 1.2 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 14 | 35 | 9.639578 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 196 | 238 | 9.138305 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 623 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 623 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11240.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037420624.1 | uncharacterized protein LOC119285453 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6HQJ3 | Utp12 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG016060.