Basic Information
Locus ID:
gene:TRIDC4AG015560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 136424738 | 136426680 | + | gene:TRIDC4AG015560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.27 | 46,269.35 Da | 56.33 | 84.84 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 142 | 185 | 3.72509E-19 | - |
| Pfam | PF13639 | Ring finger domain | 142 | 185 | 4.5E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 138 | 191 | 1.36E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 190 | 1.6E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 143 | 184 | 2.6E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 143 | 185 | 12.40076 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 355 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30400.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037420590.1 | RING-H2 finger protein ATL13-like [Triticum dicoccoides] | 0 |
| Q940Q4 | RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6HSJ0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG015560.