Basic Information
Locus ID:
gene:TRIDC4AG013800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc-finger of nitric oxide synthase-interacting protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 113836298 | 113838238 | + | gene:TRIDC4AG013800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 34,013.69 Da | 45.05 | 67.54 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04641 | Rtf2 RING-finger | 186 | 282 | 3.6E-8 | - |
| Pfam | PF15906 | Zinc-finger of nitric oxide synthase-interacting protein | 5 | 75 | 7.4E-16 | IPR031790 |
| SUPERFAMILY | SSF57850 | RING/U-box | 204 | 261 | 4.12E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 25 | 76 | 1.98E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 16 | 131 | 1.4E-8 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 174 | 284 | 1.1E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 43 | 73 | 3.3 | IPR001841 |
| SMART | SM00184 | ring_2 | 214 | 255 | 0.013 | IPR001841 |
| PIRSF | PIRSF023577 | NOSIP | 2 | 292 | 1.9E-97 | IPR016818 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 214 | 256 | 10.261575 | IPR001841 |
| Coils | Coil | Coil | 75 | 95 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61620.1 | phosphoinositide binding. | 0 |
| RefSeq | XP_037420443.1 | E3 ubiquitin-protein ligase CSU1-like [Triticum dicoccoides] | 0 |
| Q9SY88 | E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana OX=3702 GN=CSU1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HTL1 | Nitric oxide synthase-interacting protein homolog OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG013800.