Basic Information
Locus ID:
gene:TRIDC4AG013080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 103757486 | 103760525 | + | gene:TRIDC4AG013080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 35,259.59 Da | 57.08 | 76.45 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 258 | 300 | 1.99559E-24 | - |
| Pfam | PF13639 | Ring finger domain | 258 | 300 | 2.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 251 | 306 | 1.04E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 220 | 306 | 1.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 259 | 299 | 2.1E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 259 | 300 | 12.25323 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 250 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55530.1 | RING/U-box superfamily protein. Encodes an intracellular membrane localized protein with E3 ligase activity that is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA. | 0 |
| RefSeq | XP_044362998.1 | E3 ubiquitin-protein ligase SDIR1 isoform X1 [Triticum aestivum] | 0 |
| Q9M2S6 | E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453IE68 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG013080.