Basic Information
Locus ID:
gene:TRIDC4AG012640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 100444775 | 100449000 | - | gene:TRIDC4AG012640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.27 | 45,795.89 Da | 40.13 | 72.57 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 269 | 307 | 4.5E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 166 | 389 | 9.16E-30 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 163 | 393 | 1.9E-31 | IPR015943 |
| SMART | SM00320 | WD40_4 | 268 | 307 | 1.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 311 | 350 | 0.074 | IPR001680 |
| SMART | SM00320 | WD40_4 | 227 | 265 | 19.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 275 | 316 | 14.752563 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 275 | 310 | 11.840134 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 294 | 308 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78070.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037420366.1 | uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9Y7K5 | Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.03 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3B6HT95 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG012640.