Basic Information
Locus ID:
gene:TRIDC4AG010410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 77209254 | 77213037 | - | gene:TRIDC4AG010410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 43,893.23 Da | 40.76 | 82.43 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01452 | VWA_26S_proteasome_subunit | 18 | 202 | 3.08633E-110 | - |
| Pfam | PF02809 | Ubiquitin interaction motif | 237 | 250 | 0.1 | IPR003903 |
| Pfam | PF02809 | Ubiquitin interaction motif | 334 | 348 | 0.025 | IPR003903 |
| Pfam | PF02809 | Ubiquitin interaction motif | 303 | 315 | 0.24 | IPR003903 |
| Pfam | PF13519 | von Willebrand factor type A domain | 20 | 128 | 8.9E-27 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 17 | 193 | 3.84E-37 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 18 | 200 | 1.6E-80 | IPR036465 |
| Gene3D | G3DSA:1.10.287.3990 | - | 233 | 347 | 3.7E-18 | - |
| SMART | SM00726 | uim | 333 | 352 | 0.29 | IPR003903 |
| SMART | SM00726 | uim | 235 | 254 | 0.087 | IPR003903 |
| SMART | SM00726 | uim | 300 | 319 | 7.0 | IPR003903 |
| SMART | SM00327 | VWA_4 | 16 | 189 | 1.7E-8 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 19 | 203 | 11.256663 | IPR002035 |
| ProSiteProfiles | PS50330 | Ubiquitin-interacting motif (UIM) domain profile. | 235 | 254 | 10.427235 | IPR003903 |
| ProSiteProfiles | PS50330 | Ubiquitin-interacting motif (UIM) domain profile. | 333 | 352 | 9.568785 | IPR003903 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 415 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38630.1 | regulatory particle non-ATPase 10. Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities | 0 |
| RefSeq | XP_044362729.1 | 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [Triticum aestivum] | 0 |
| O82143 | 26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RPN10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HPL8 | VWFA domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG010410.