Basic Information
Locus ID:
gene:TRIDC4AG010190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 74817921 | 74819274 | - | gene:TRIDC4AG010190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 47,553.65 Da | 43.01 | 102.27 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 35 | 107 | 1.5E-20 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 32 | 110 | 1.9E-28 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 200 | 428 | 4.22E-15 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 113 | 7.8E-29 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 133 | 437 | 2.0E-14 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 38 | 102 | 3.8E-30 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 34 | 109 | 36.454895 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_037424159.1 | U-box domain-containing protein 21-like [Triticum dicoccoides] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453IJK9 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG010190.