Basic Information
Locus ID:
gene:TRIDC4AG006950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 41156042 | 41161061 | - | gene:TRIDC4AG006950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 66,389.04 Da | 40.51 | 84.05 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 41 | 70 | 0.01 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 88 | 114 | 0.037 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 41 | 383 | 1.37E-38 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 29 | 171 | 1.8E-17 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 172 | 407 | 9.3E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 73 | 114 | 0.0085 | IPR001680 |
| SMART | SM00320 | WD40_4 | 222 | 262 | 0.54 | IPR001680 |
| SMART | SM00320 | WD40_4 | 345 | 384 | 0.11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 33 | 70 | 0.12 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 89 | 123 | 10.541869 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 101 | 115 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 570 | 590 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 607 | - | - |
| Coils | Coil | Coil | 275 | 295 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21060.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037419924.1 | protein RBL-like [Triticum dicoccoides] | 0 |
| Q5E915 | Protein RBL OS=Arabidopsis thaliana OX=3702 GN=RBL PE=1 SV=1 | 0 | |
| TrEMBL | A0A453IPJ6 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG006950.